The genotype frequency files for all the AISNP panels used for the computations can be downloaded from here.
New Format - SAMPLE_UID is unique to each sample. ALFRED (UID Search) can be searched using this variable. In addition, the sample names in the new format corresponds to the names in "Population Likelihoods' table.
Panel | Genotype Frequency | New Format | Allele Frequency | Population Sample X SNP Count |
---|---|---|---|---|
Seldin's list of 128 AISNPs | 128SeldinAI_.txt | Seldin128_alleleF.txt | 70 X 128 | |
SNPforID 34-plex | 34PlexAI_.txt | SNPForId34_alleleF.txt | 53 X 34 | |
KiddLab - Set of 55 AISNPs | 55KiddLabAI_.txt | 55KiddLabAI_New.txt | KiddLab55_alleleF.txt | 139 X 55 (updated) |
Kayser's set of 24 Ancestry Informative Markers | 24KayserAI_.txt | Kayser24_alleleF.txt | 73 X 24 | |
Daniele Podini's list of 32 AISNPs (29) | 32PodiniAI_.txt | Podini32_alleleF.txt | 111 X 29 | |
Eurasiaplex 23 SNP Panel | 23EurasiaplexAI_.txt | Eurasiaplex23_alleleF.txt | 76 X 23 | |
Nievergelt's Set of 41AIMs | 41NievergeltAI_.txt | Nievergelt41_alleleF.txt | 123 X 41 | |
Overlap set of AISNPs | 44OverlapAI_.txt | Overlap44_alleleF.txt | 72 X 44 | |
Li's panel of 74 AIMS | 74LiAI_.txt | Li74_alleleF.txt | 67 X 73 |